Occurrence record: GeneticSamples:G48276

MaterialSample of Mus musculus | House Mouse recorded on 2020-04-06

Dataset

Data provider OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource Australian National Wildlife Collection provider for OZCAM
Institution Commonwealth Scientific and Industrial Research Organisation
Supplied institution code "ANWC"
Collection Australian National Wildlife Collection
Supplied collection code "GeneticSamples"
Catalogue Number G48276
Basis of record MaterialSample
Preparations liver
Sex male
License CC-BY
Collection ID urn:lsid:biocol.org:col:34932
Disposition in collection
Relationship of resource same individual
Rightsholder CSIRO
Dataset name ANWC salvage post-Nagoya (12/10/2014)
Bibliographic citation G48276
Associated occurrences ANWC:Mammals:M38416
Establishment means wild location
Occurrence status present
Dataset ID urn:anwc.csiro.au:collections:130
Abcd identification qualifier Not provided

Event

Record date 2020-04-06
Date precision Day
Verbatim event date 6 April 2020

Taxonomy

Scientific name Mus musculus
Taxon rank species
Common name House Mouse
Kingdom Animalia
Phylum Chordata
Class Mammalia
Order Rodentia
Family Muridae
Genus Mus
Species Mus musculus
Taxonomic issues No issues
Name match metric Exact match
The supplied name matched the name exactly.
Name parse type SCIENTIFIC

Geospatial

Country Australia
State or Territory South Australia
Local government area Mallala (DC)
Locality Barabba
Latitude -34.3703
Longitude 138.5927
Geodetic datum EPSG:4326
Verbatim locality Barabba
Water body not applicable
Island not applicable
Island group not applicable
Coordinate precision 0.0001
Coordinate uncertainty in metres 2000.0
Verbatim SRS WGS84
Continent Australia
County not applicable
Biome Terrestrial

Additional properties

loan conditions approval from ANWC Director
material sample id catalogNumber=G48276&collectionCode=GeneticSamples&institutionCode=ANWC
material sample type tissue
permit status not required
permit status qualifier salvaged; exempt
permit type not applicable
preparation date not recorded
preparation materials none
prepared by Haff, T.
preservation temperature -80 degrees Celsius
preservation type tube
verbatim uncertainty confident in available location data

User flagged issues 

User Assertion Status:

    Data quality tests

    Test name Result
    Geodetic datum assumed WGS84 Warning
    Basis of record not supplied Passed
    Basis of record badly formed Passed
    Invalid collection date Passed
    Incomplete collection date Passed
    First of the month Passed
    Cultivated / escapee Passed
    Missing catalogue number Passed
    Data are generalised Passed
    Collection code not recognised Passed
    Institution code not recognised Passed
    Name not supplied Passed
    Kingdom not recognised Passed
    Name not recognised Passed
    Resource taxonomic scope mismatch Passed
    Invalid scientific name Passed
    Name not in national checklists Passed
    Decimal coordinates not supplied Passed
    Coordinates are transposed Passed
    Coordinates are out of range for species Passed
    Supplied coordinates are zero Passed
    Zero latitude Passed
    Zero longitude Passed
    Supplied country not recognised Passed
    Coordinate uncertainty not valid Passed
    Missing coordinate precision Passed
    Precision / range mismatch Passed
    Coordinate precision not valid Passed
    Coordinate uncertainty not specified Passed
    Location not supplied Passed
    Country inferred from coordinates Passed
    Supplied coordinates centre of state Passed
    Coordinates centre of country Passed
    Missing geodetic datum Passed
    Coordinates dont match supplied state Passed
    Habitat incorrect for species Passed
    Show/Hide 10 missing properties
    Show/Hide 40 tests that have not been run

    Additional political boundaries information

    Area Management
    Fallow practice - dominant (area) Fallow less than 3 months
    Fallow practice - dominant (number) Fallow less than 3 months
    Global 200 priority ecoregions - Marine Southern Australian Marine
    Global 200 priority ecoregions - Terrestrial Southern Australia Mallee and Woodlands
    Irrigation practice - dominant No irrigation
    Land use Cropping
    NRM Regions 2010 Adelaide and Mount Lofty Ranges
    NRM Regions 2014 Adelaide and Mount Lofty Ranges
    NRM Regions 2015 Adelaide and Mount Lofty Ranges
    NRM Regions 2017 Adelaide and Mount Lofty Ranges
    NRM Regions 2017 (Qld 2019) Adelaide and Mount Lofty Ranges
    Stubble practice - dominant (area) Removed by hot burn
    Stubble practice - dominant (number) Removed by hot burn
    Tillage practice - dominant (area) 1-2 cultivations
    Tillage practice - dominant (number) 1-2 cultivations
    Area management
    National Landcare Program Management Units 2018 Adelaide and Mount Lofty Ranges
    Biodiversity
    Freshwater Ecoregions of the World Murray - Darling
    IBRA 6 Regions Eyre Yorke Block
    IBRA 6 Sub Regions St Vincent
    IBRA 7 Regions Eyre Yorke Block
    IBRA 7 Subregions St Vincent
    Terrestrial Ecoregional Boundaries Eyre And York Mallee
    World Anthropogenic Biomes (2000) Populated croplands
    Climate
    Agroclimatic classification of Australia "Mediterranean" climate, but with drier cooler winters and less growth than Classic "Mediterranean" climate
    Koppen Climate Classification (All Classes) Grassland: warm (persistently dry)
    Koppen Climate Classification (Major Classes) Grassland
    Fire
    Fire regime niches Pasture, cropland (temperate)
    Hydrology
    Drainage Divisions Level 1 South Australian Gulf
    Drainage Divisions Level 2 GAWLER RIVER
    River Regions GAWLER RIVER
    Marine
    Marine Ecoregions of the World South Australian Gulfs
    States including coastal waters South Australia (including Coastal Waters)
    Political
    ASGS Australian States and Territories South Australia
    Australian States and Territories South Australia
    Commonwealth Electoral Boundaries Wakefield
    Local Government Areas 2011 Mallala (DC)
    Local Government Areas 2012 deprecated Mallala
    Local Government Areas PSMA 2018 ADELAIDE PLAINS COUNCIL
    PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016) 8
    PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016) 573
    PSMA ABS Greater Capital City Statistical Areas (2016) REST OF SA
    PSMA ABS SA2 Statistical Areas (2016) MALLALA
    PSMA ABS SA3 Statistical Areas (2016) BAROSSA
    PSMA ABS SA4 Statistical Areas (2016) BAROSSA - YORKE - MID NORTH
    PSMA Commonwealth Electoral Boundaries (2016) WAKEFIELD
    PSMA Commonwealth Electoral Boundaries (2018) GREY
    PSMA Indigenous Areas (2016) BAROSSA
    PSMA Indigenous Locations (2016) BAROSSA
    PSMA Indigenous Regions (2016) ADELAIDE
    PSMA Localities (2018) GRACE
    PSMA Remoteness Areas (2016) Inner Regional Australia
    PSMA Section of State (2016) RURAL BALANCE
    PSMA Section of State Range (2016) REMAINDER OF STATE/TERRITORY
    PSMA Significant Urban Area (2016) NOT IN ANY SIGNIFICANT URBAN AREA (SA)
    PSMA State Electoral Boundaries (2016) LEGISLATIVE COUNCIL
    PSMA State Electoral Boundaries (2018) LEGISLATIVE COUNCIL
    PSMA States (2016) SOUTH AUSTRALIA
    PSMA Urban Centre and Locality (2016) REMAINDER OF STATE/TERRITORY (SA)
    PSMA Wards (2018) MALLALA/DUBLIN WARD
    Statistical Local Areas Mallala (DC)
    World Country Boundaries Australia
    Substrate
    Geological Regions of Australia St Vincent Region
    Surface Geology of Australia Qrc
    Topography
    Physiographic Provinces of Australia Gulfs Ranges Province
    Physiographic Regions 2011 Torrens-Gulf Plains
    Vegetation
    Australia's Indigenous forest estate (2013) v2.0 Non-Indigenous, Non forest
    Forests of Australia (2013) v2.0 Non Forest
    Land cover Annual crops and highly modified pastures
    NVIS 4.1 Major Vegetation Groups Cleared, non-native vegetation, buildings
    NVIS 4.1 Major Vegetation Subgroups Cleared, non-native vegetation, buildings
    Tenure of Australia's forests (2013) v2.0 Private Freehold
    Vegetation - condition Replaced
    Vegetation types - native Mallee woodlands and shrublands
    Vegetation types - present cleared, non-native vegetation, buildings

    Environmental sampling for this location

    Area Management
    Natural resource management expenditure 3243824.0 $
    Area management
    Phosphorus 0.025197027 t/ha
    Potassium 0.046305053 t/ha
    Biodiversity
    Acacia – Miller et al 2012 - 0.5 degree 0.908
    Amphibians (global) – Pyron & Wiens 2011 - 0.5 degree 2.891
    Endemism 0.003993496
    Endemism (Non-marine) 0.0040605385
    Mammals – Fritz et al 2009 - 0.5 degree 0.3689
    Migratory species (2008) 3.0 frequency
    Occurrence Density 3712.0 frequency
    Shannon Diversity (H) 4.899751 index
    Species Richness 391.0 frequency
    Threatened communities (2008) 0.0 frequency
    Threatened species (2008) 3.0 frequency
    Climate
    2030A1BMk35M: Aridity index - annual mean 0.34683222
    2030A1BMk35M: Evaporation - month min 50.3 mm
    2030A1BMk35M: Precipitation - annual mean 31.4875 mm
    2030A1BMk35M: Precipitation - driest month 13.59 mm
    2030A1BMk35M: Precipitation - equinox seasonality ratio 1.5096865
    2030A1BMk35M: Precipitation - spring or autumn season 0.50327206
    2030A1BMk35M: Temperature - annual max mean 23.750834 degrees C
    2030A1BMk35M: Temperature - annual min mean 11.094167 degrees C
    2030A1BMk35M: Temperature - annual range 25.199982 degrees C
    Aridity index - annual mean 0.39802667
    Aridity index - month max 0.947655
    Aridity index - month min 0.070660286
    Evaporation - annual mean 144.91078 (ml/5km x 5km pixel)
    Evaporation - average 10942.0 ml
    Evaporation - month max 268.8922 mm
    Evaporation - month min 49.596107 mm
    Evaporation - variability 11.0 %
    Growth index C3 macrotherm plants - annual mean 0.04 index
    Growth index C3 mesotherm plants - annual mean 0.19 index
    Growth index C4 megatherm plants - annual mean 0.03 index
    Humidity - annual mean relative 75.49031 %
    Humidity - annual mean relative 3pm 63.97481 %
    Humidity - month max relative 89.62369 %
    Humidity - month max relative 3pm 77.581825 %
    Humidity - month min relative 50.71153 %
    Humidity - month min relative 3pm 50.71153 %
    Precipitation - annual 394.0 mm
    Precipitation - annual (Bio12) 429.0 mm
    Precipitation - annual mean 35.466503 mm
    Precipitation - annual seasonality -0.85905695
    Precipitation - coldest quarter (Bio19) 158.0 mm
    Precipitation - driest month 17.520193 mm
    Precipitation - driest period (Bio14) 4.0 mm
    Precipitation - driest quarter (Bio17) 55.0 mm
    Precipitation - equinox seasonality ratio 1.1563264
    Precipitation - seasonality (Bio15) 41.0 mm
    Precipitation - spring or autumn season 0.15477121
    Precipitation - warmest quarter (Bio18) 55.0 mm
    Precipitation - wettest month 52.0 mm
    Precipitation - wettest period (Bio13) 14.0 mm
    Precipitation - wettest quarter (Bio16) 158.0 mm
    Radiation - annual mean (Bio20) 17.8 MJ/m2/day
    Radiation - seasonality (Bio23) 40.0
    Radiation - warmest quarter (Bio26) 26.0 MJ/m2/day
    Temperature - annual max mean 21.865 degrees C
    Temperature - annual mean (Bio01) 16.4 degrees C
    Temperature - annual min mean 9.974167 degrees C
    Temperature - annual range 23.600006 degrees C
    Temperature - annual range (Bio07) 25.4 degrees C
    Temperature - coldest month min 5.4 degrees C
    Temperature - coldest period min (Bio06) 5.6 degrees C
    Temperature - coldest quarter mean (Bio11) 10.9 degrees C
    Temperature - diurnal range mean (Bio02) 12.5 degrees C
    Temperature - driest quarter mean (Bio09) 22.2 degrees C
    Temperature - isothermality (Bio03) 0.49 %
    Temperature - month hottest maximum 29.32 degrees C
    Temperature - seasonality (Bio04) 1.54
    Temperature - warmest month min 15.09 degrees C
    Temperature - warmest period max (Bio05) 31.0 degrees C
    Temperature - warmest quarter (Bio10) 22.2 degrees C
    Temperature - wettest quarter mean (Bio08) 11.0 degrees C
    Wind run - annual mean 212.2078 km/day
    WorldClim: Precipitation - annual 438.0 mm
    WorldClim: Precipitation - coldest quarter 155.0 mm
    WorldClim: Precipitation - driest month 17.0 mm
    WorldClim: Precipitation - driest quarter 56.0 mm
    WorldClim: Precipitation - seasonality 38.0
    WorldClim: Precipitation - warmest quarter 58.0 mm
    WorldClim: Precipitation - wettest month 55.0 mm
    WorldClim: Precipitation - wettest quarter 155.0 mm
    WorldClim: Temperature - annual mean 163.0 degrees C * 10
    WorldClim: Temperature - annual range 245.0 degrees C * 10
    WorldClim: Temperature - coldest month min 57.0 degrees C * 10
    WorldClim: Temperature - coldest quarter mean 107.0 degrees C * 10
    WorldClim: Temperature - diurnal range mean 120.0 degrees C * 10
    WorldClim: Temperature - driest quarter mean 218.0 degrees C * 10
    WorldClim: Temperature - isothermality 48.0 %
    WorldClim: Temperature - seasonality 4423.0 standard deviation (degrees C * 10) * 100
    WorldClim: Temperature - warmest month max 302.0 degrees C * 10
    WorldClim: Temperature - warmest quarter mean 220.0 degrees C * 10
    WorldClim: Temperature - wettest quarter mean 115.0 degrees C * 10
    Distance
    Distance - to any water (weighted) 0.03 degrees
    Distance - to coast 0.3023243 km x 100
    Distance - to non-permanent water (weighted) 0.03 degrees
    Distance - to permanent water (weighted) 0.2745906 km
    Euclidean Distance to Coast (metres) 22088.672 m
    Remoteness index 1.9410086
    Hydrology
    Drainage - average 69.0 megalitres/5x5km/year
    Drainage - variability 181.0 %
    Runoff - average 0.0 megalitres/5x5km/year
    Water Observations From Space 0.0 Percentage
    Social
    Population - density SLA 2006 p/sqkm) 8.461176 people/km^2
    Substrate
    2030A1BMk35M: Water stress index - month max 80.277565
    ASRIS 0-1m Plant Available Water Capacity (250m raster) 121.0 mm
    ASRIS 0-30cm Bulk Density (250m raster) 1.42 Mg/m3
    ASRIS 0-30cm Clay Content (250m raster) 39.0 %
    Bulk density 1.5747082 Mg/m^3
    Carbon - organic 0.81459326 %
    Clay % 36.326847 %
    Hydrologic conductivity - average saturated 50.0 mm/h
    Moisture Index - annual mean (Bio28) 0.37
    Moisture Index - highest quarter mean (Bio32) 0.76
    Nutrient status 1.55 index
    Ph - soil 7.0 ph
    Soil depth 0.7 m
    Soil pedality 2.9356031
    Water holding capacity 28000.0 mm
    Water stress index - month max 80.90574
    Weathering Intensity V2 4.16136 Weathering Intensity Index
    Topography
    Aspect 315.0 degrees
    Averaged Topographic Relief 60.25 metres
    Bathymetry and Topography 9 sec 104.0 m
    Elevation 100.0 m
    Topographic Slope (degrees) 0.6316468 degrees
    Topographic relief 8.584618 m
    Topographic slope (%) 0.4650068 %
    Vegetation
    Enhanced Vegetation Index (2012-03-05) 0.1272 EVI
    Fraction of Photosynthetically Active Radiation (fPAR) 16.0 %
    Fractional Cover - Bare Soil (2012-03-05) 20.0 % Bare Soil
    Fractional Cover - Non-persistent Vegetation (2012-03-05) 69.0 % Non-persistent Vegetation
    Fractional Cover - Persistent Vegetation (2012-03-05) 11.0 % Persistent Vegetation
    Gross Primary Productivity (2012-03-13) 0.0046 kg C/m^2
    Leaf Area Index (LAI) - 2012-03-05 0.3 m^2 plant / m^2 ground
    NDVI Mean 43.0 NDVI x 100
    NPP Mean 3.0 tonnes/ha/yr
    Normalized Difference Vegetation Index (2012-03-05) 0.2195 NDVI