Occurrence record: DNA Laboratory:Z27817

Material Sample of Rattus lutreolus (J.E. Gray, 1841) | Swamp Rat recorded on 2013-11-24

API

Dataset

Data partner	OZCAM (Online Zoological Collections of Australian Museums) Provider
Data resource	Museums Victoria provider for OZCAM
Institution code	Museums Victoria Supplied institution code "NMV"
Collection	Museums Victoria DNA Laboratory Supplied collection code "DNA Laboratory"
Catalog number	Z27817
Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z27817
Record type	Material Sample Supplied basis "MaterialSample"
Preparations	Tissue\|Frozen\|ethanol 70%\|Ear\|-196°C
Identified by	Phoebe Burns - Museum Victoria
Identified date	26/11/2013
Collector	1. Burns, Phoebe 2. Museum Victoria Supplied as "Phoebe Burns - Museum Victoria"
Sex	Female
Individual count	1
Life stage	Adult
Associated Occurrence Status	Representative record
Associated occurrences	This record has 5 inferred associated occurrences For more information see Inferred associated occurrence details
License	CC0 Supplied as https://creativecommons.org/publicdomain/zero/1.0/legalcode
Rights holder	Museums Victoria
Institution ID	urn:lsid:biocol.org:col:34978
Language	en
Presence/Absence	PRESENT Supplied as present
Owner institution code	NMV
Associated records	REPRESENTATIVE
Disposition	In collection
Date identified	2013-11-26 Supplied as 26/11/2013

Event

Dataset / Survey name	Phoebe Burns Grampians Sep-Dec 2013
Occurrence date	2013-11-24 Supplied date "2013-11-24T00:00:00\2013-11-27T00:00:00"
Sampling protocol	Elliott trap
Date precision	DAY

Taxonomy

Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
Scientific name	Rattus lutreolus Supplied scientific name "Rattus lutreolus (Gray, 1841)"
Identified to rank	species
Common name	Swamp Rat Supplied common name "Australian Swamp Rat"
Kingdom	Animalia
Phylum	Chordata
Class	Mammalia
Order	Rodentia
Family	Muridae
Genus	Rattus
Species	Rattus lutreolus
Name match metric	canonicalMatch
Scientific name authorship	(J.E. Gray, 1841) Supplied as (Gray, 1841)
Name parse type	SCIENTIFIC
Nomenclatural code	ICZN

Geospatial

Higher geography	Australia \| Victoria
Country	Australia
State or Territory	Victoria
Locality	Grampians National Park, Victoria Range, off Bullawin Road
Latitude	-37.4296 Supplied as: "-37.4296"
Longitude	142.247 Supplied as: "142.247"
Datum	EPSG:4326 Supplied datum: "GDA94"
Verbatim locality	Grampians National Park, Victoria Range, off Bullawin Road
Min elevation	363
Max elevation	420
Coordinate precision	Unknown
Georeference sources	Collector
Georeference protocol	GARMIN GPSmap 62s
Georeferenced by	Phoebe Burns - Museum Victoria
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU
Location ID	SB43

Additional properties

material sample type	Tissue
preparation materials	ethanol 70%
preparation type	Ear
prepared by	Phoebe Burns - Museum Victoria
preservation date begin	2013-11-26T00:00:00
preservation temperature	-196°C
preservation type	ethanol 70%

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Recorded date invalid	Warning
Show/Hide 104 passed properties
Ambiguous collection	Passed
Ambiguous institution	Passed
Basis of record badly formed	Passed
Collection match fuzzy	Passed
Collection not matched	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country inferred from coordinates	Passed
Country invalid	Passed
Country mismatch	Passed
Different owner institution	Passed
Min and max altitude reversed	Passed
Altitude value non-numeric	Passed
Altitude value supplied in feet	Passed
Elevation unlikely	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Geodetic datum assumed WGS84	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identified date invalid	Passed
Identified date unlikely	Passed
Identification date before occurrence date	Passed
Individual count conflicts with occurrence status	Passed
Individual count invalid	Passed
Institution and Collection mismatch	Passed
Institution match fuzzy	Passed
Institution not matched	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Missing geodetic datum	Passed
Missing georeferenced by	Passed
Missing georeference protocol	Passed
Missing georeference sources	Passed
Missing taxon rank	Passed
Modified date invalid	Passed
Modified date unlikely	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
Taxon match higher rank	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Unrecognized collection code	Passed
Unrecognized institution code	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 2 missing properties
Missing georeference verification status	Missing
Missing georeference date	Missing
Show/Hide 16 tests that have not been run
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
TAXON_MATCH_TAXON_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
TAXON_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)

Inferred associated occurrence details

This record has been identified as the representative occurrence in a group of associated occurrences. This mean other records have been detected that seem to relate to this record and this particular record has the most detailed information on the occurrence. More information about the duplication detection methods and terminology in use is available here:

https://github.com/AtlasOfLivingAustralia/ala-dataquality/wiki/INFERRED_DUPLICATE_RECORD

Representative Record
Record UUID	223fd4f9-d58f-4620-994b-f1f880c2d49c
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247
Related records
Record UUID	26515986-ad00-40ab-9d78-49d4ab0e1929
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247
Record UUID	84afeaff-330e-4345-ae79-ae6fdcaed2d2
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247
Record UUID	b6fecd45-382b-43a8-a107-5ff1265f569a
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247
Record UUID	ce9f6bd5-0676-441b-acbd-c66a1c904311
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247
Record UUID	545bb412-e797-4f24-a7d8-84f10e8f9d2b
Data Resource	Museums Victoria provider for OZCAM
Raw Scientific Name	Rattus lutreolus (Gray, 1841)
Coordinates	-37.4296,142.247

Additional political boundaries information

Area Management
CAPAD 2016 Terrestrial	Coffs Coast
CAPAD 2020 Terrestrial	Coffs Coast
GER National Corridor	GER National Corridor
Great Eastern Ranges Initiative	GER Great Eastern Ranges Initiative
NRM Regions 2010	Northern Rivers
NRM Regions 2017	North Coast
Area management
National Landcare Program Management Units 2018	North Coast
Biodiversity
IBRA 6 Regions	NSW North Coast
IBRA 7 Regions	NSW North Coast
IBRA 7 Subregions	Coffs Coast and Escarpment
Hydrology
Drainage Divisions Level 1	South East Coast (Victoria)
Drainage Divisions Level 2	GLENELG RIVER
Marine
States including coastal waters	New South Wales (including Coastal Waters)
Political
ASGS Australian States and Territories	New South Wales
Australian States and Territories	New South Wales
Local Government Areas 2011	Coffs Harbour (C)
Local Government Areas 2012 deprecated	Coffs Harbour - Pt B
Local Government Areas PSMA 2018	COFFS HARBOUR CITY COUNCIL
PSMA ABS Census Indigenous Language Speakers by Area - I01B (2016)	102
PSMA ABS Census Selected Person Characteristics by Indigenous Status by Area - I01A (2016)	5553
PSMA ABS Greater Capital City Statistical Areas (2016)	REST OF NSW
PSMA ABS SA2 Statistical Areas (2016)	WOOLGOOLGA - ARRAWARRA
PSMA ABS SA3 Statistical Areas (2016)	COFFS HARBOUR
PSMA ABS SA4 Statistical Areas (2016)	COFFS HARBOUR - GRAFTON
PSMA Commonwealth Electoral Boundaries (2018)	PAGE
PSMA Indigenous Areas (2016)	COFFS HARBOUR - NAMBUCCA
PSMA Indigenous Locations (2016)	COFFS HARBOUR
PSMA Indigenous Regions (2016)	NSW CENTRAL AND NORTH COAST
PSMA Remoteness Areas (2016)	Inner Regional Australia
PSMA State Electoral Boundaries (2018)	COFFS HARBOUR
PSMA States (2016)	NEW SOUTH WALES
World Country Boundaries	Australia
Vegetation
Australia's Indigenous forest estate (2013) v2.0	Non-Indigenous, Native forest
Forests of Australia (2013) v2.0	Eucalypt Medium Open
Forests of Australia 2018B	Non forest
NVIS 4.1 Major Vegetation Groups	Eucalypt Open Forests
NVIS 4.1 Major Vegetation Subgroups	Eucalyptus open forests with a shrubby understorey
Tenure of Australia's forests (2013) v2.0	Nature Conservation Reserve
Vegetation types - native	Eucalypt woodlands
Vegetation types - present	Eucalyptus woodlands

Environmental sampling for this location

Climate
Precipitation - annual (Bio12)	1513.0 mm
Precipitation - coldest quarter (Bio19)	215.5 mm
Precipitation - driest period (Bio14)	8.0 mm
Precipitation - driest quarter (Bio17)	162.0 mm
Precipitation - seasonality (Bio15)	46.0 mm
Precipitation - warmest quarter (Bio18)	525.5 mm
Precipitation - wettest period (Bio13)	52.5 mm
Precipitation - wettest quarter (Bio16)	588.5 mm
Radiation - annual mean (Bio20)	16.8 MJ/m2/day
Radiation - seasonality (Bio23)	28.0
Radiation - warmest quarter (Bio26)	20.2 MJ/m2/day
Temperature - annual mean (Bio01)	19.3 degrees C
Temperature - annual range (Bio07)	18.95 degrees C
Temperature - coldest period min (Bio06)	8.9 degrees C
Temperature - coldest quarter mean (Bio11)	14.7 degrees C
Temperature - diurnal range mean (Bio02)	9.0 degrees C
Temperature - driest quarter mean (Bio09)	16.2 degrees C
Temperature - isothermality (Bio03)	0.47 %
Temperature - seasonality (Bio04)	1.165
Temperature - warmest period max (Bio05)	27.9 degrees C
Temperature - warmest quarter (Bio10)	23.45 degrees C
Temperature - wettest quarter mean (Bio08)	21.3 degrees C
WorldClim 2.1: Temperature - annual mean	11.933333 °C
WorldClim: Temperature - isothermality	50.0 %
Substrate
Moisture Index - annual mean (Bio28)	0.83
Moisture Index - highest quarter mean (Bio32)	1.0
Elevation	493.0 m

Group	Field Name	Original Value	Processed Value
Classification	Scientific name	Rattus lutreolus (Gray, 1841)	Rattus lutreolus
	Match type		canonicalMatch
	Phylum id		https://biodiversity.org.au/afd/taxa/065f1da4-53cd-40b8-a396-80fa5c74dedd
	Family id		https://biodiversity.org.au/afd/taxa/681ec45e-8530-43c5-961b-4e34c88083ab
	Taxon concept ID		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Order	Rodentia	Rodentia
	Taxon rank id		7000
	Species id		https://biodiversity.org.au/afd/taxa/2910ea05-7539-434c-bcc8-ca48d038b82b
	Genus	Rattus	Rattus
	Left		53550
	Higher classification	Animalia \| Chordata \| Vertebrata \| Mammalia \| Rodentia \| Myomorpha \| Muroidea \| Muridae \| Murinae
	Scientific name authorship	(Gray, 1841)	(J.E. Gray, 1841)
	Taxon rank	Species	species
	Genus id		https://biodiversity.org.au/afd/taxa/ed4cd895-36f0-4fe6-bfa3-d14e6970b2df
	Name type		SCIENTIFIC
	Vernacular name	Australian Swamp Rat	Swamp Rat
	Nomenclatural code	ICZN
	Order id		https://biodiversity.org.au/afd/taxa/985cb64a-33d2-44fe-b806-8aa848fdafdf
	Right		53556
	Kingdom	Animalia	Animalia
	Specific epithet	lutreolus
	Class id		https://biodiversity.org.au/afd/taxa/e9e7db31-04df-41fb-bd8d-e0b0f3c332d6
	Phylum	Chordata	Chordata
	Class	Mammalia	Mammalia
	Species		Rattus lutreolus
	Family	Muridae	Muridae
	Kingdom id		https://biodiversity.org.au/afd/taxa/4647863b-760d-4b59-aaa1-502c8cdf8d3c
Event	Year	2013	2013
	Dataset / Survey name	[Phoebe Burns Grampians Sep-Dec 2013]
	Month	11	11
	Date precision		DAY
	Day	24	24
	Event date	2013-11-24T00:00:00\2013-11-27T00:00:00	2013-11-24
Identification	Date identified	26/11/2013	2013-11-26
Identification	Identified by	[Phoebe Burns - Museum Victoria]
Occurrence	Associated occurrences		ce9f6bd5-0676-441b-acbd-c66a1c904311\|b6fecd45-382b-43a8-a107-5ff1265f569a\|545bb412-e797-4f24-a7d8-84f10e8f9d2b\|84afeaff-330e-4345-ae79-ae6fdcaed2d2\|26515986-ad00-40ab-9d78-49d4ab0e1929
	Rights holder		Museums Victoria
	Institution ID	urn:lsid:biocol.org:col:34978
	Individual count	1	1
	Duplication status		R
	Language	en
	Type		PhysicalObject
	Catalog number	Z27817
	Occurrence status	present	PRESENT
	Basis of record	MaterialSample	MATERIAL_SAMPLE
	Modified	2020-09-28T16:56:00	2020-09-28T16:56
	Collection code	DNA Laboratory
	Occurrence ID	urn:lsid:ozcam.taxonomy.org.au:NMV:DNA Laboratory:MaterialSample:Z27817
	Owner institution code	NMV
	Sampling protocol	[Elliott trap]
	Preparations	Tissue\|Frozen\|ethanol 70%\|Ear\|-196°C
	Duplicate status		REPRESENTATIVE
	Institution code	NMV
	Sex	Female	FEMALE
	Dataset / Survey name	[Phoebe Burns Grampians Sep-Dec 2013]
	Disposition	In collection
	Recorded by	Phoebe Burns - Museum Victoria	[Burns, Phoebe, Museum Victoria]
	Life stage	Adult	{"concept": "Adult", "lineage": ["Adult"]}
Attribution	Data resource		Museums Victoria provider for OZCAM
	Collection		Museums Victoria DNA Laboratory
	License	https://creativecommons.org/publicdomain/zero/1.0/legalcode	CC0
	Data provider uid		dp20
	Provenance		Published dataset
	Data Resource ID	dr342	dr342
	Institution ID		in16
	Data partner		OZCAM (Online Zoological Collections of Australian Museums) Provider
	Institution		Museums Victoria
	Data hub uid	[dh1]
	Collection ID		co274
Location	Country	Australia	Australia
	Decimal latitude	-37.4296	-37.4296
	Terrestrial	true	true
	Higher geography	Australia \| Victoria
	Georeferenced by	Phoebe Burns - Museum Victoria
	Locality	Grampians National Park, Victoria Range, off Bullawin Road	Grampians National Park, Victoria Range, off Bullawin Road
	Minimum elevation in meters	363	363.0
	Decimal longitude	142.247	142.247
	State province	Victoria	Victoria
	Verbatim locality	Grampians National Park, Victoria Range, off Bullawin Road
	Maximum elevation in meters	420	420.0
	Biome		TERRESTRIAL
	Lga	Southern Grampians (S)
	Marine	false	false
	Country code		AU
	Georeference protocol	GARMIN GPSmap 62s
	Geodetic datum	GDA94	EPSG:4326
	Location ID	SB43
	Georeference sources	Collector